Decked Builder is my favorite app for building Magic decks and looking up cards quickly. Can't recommend it highly enough. This is coming from a normal user of the app for 5 or so years, I'm not associated with the developers in any way or paid to say this. Its only a few bucks to buy buy the app and it updates whenever new cards are made for free. I use it literally all the time pretty much every day.
Oh yeah and it has a collection tracking feature, which is what you actually asked about.
February 4, 2020 9:16 a.m. Edited.
MTG Familiar I believe has that functionality, as well as many others.